Physical Geology   Chapter 2   Atoms, Elements, & Minerals

 

Basics of Chemistry

 

    element       electron

    atom            ion

    proton          cation / anion

    neutron        molecule

 

 

Atomthe smallest unit of matter that displays all of the properties of the element

 

Parts of an Atom     Figure 2.3

 

Nucleus - the center of the atom, with most of the mass (analogous to the solar system)

 

composed of: protons positively charged particles (+)  and

neutrons neutrally charged particles (0)

 

 

Electrons - negatively charged particles that orbit the nucleus in discrete shells (-)

 

 

An electrically stable atom has the same number of protons as electrons

   the charges balance  (+) = (-)

 

 

 

An element is defined by the number of protons in the nucleus

 

Examples:

 

  1 proton     hydrogen             26 protons    iron

  6 protons    carbon                92 protons    uranium

  8 protons    oxygen

 

 

The Periodic Table of the Elements

 

 

Electron Shells determine chemical reactions

           

Figures 2.4 and

 

2.5

 

Ionsif the charges on an atom don’t balance:

 

  cation – a positive ion, “missing” one or

              more electrons  { cat ion }

 

              most metals produce cations

              example:  Na+

 

  anion – a negative ion, with one or more

              “extra” electrons  { an ion }

 

              example:  Cl  

 

Elemental cations and anions

 

    the configuration of the electron shells determines the preferred ionic charge

 

Groups of elements with similar properties, also determined by the electron shells

 

Isotopes of an element – same number of protons

  but a different number of neutrons

 

Stable isotopes and radio-isotopes

 

 

 

 

 

 

Stable isotopes do NOT decay radioactively

Examples:  1H and 2H (stable)

, 3H tritium (radioactive)

                              12C and 13C (stable), 14C (radioactive)

 

Molecules  two or more atoms bonded together

 

covalent bond – example of water molecule

            one  oxygen atom shares electrons with two hydrogen atoms

 

States (or Phases) of Matter

GAS        disorder among molecules

LIQUID    short-range order

SOLID     long-range order

 

What Is Heat?

 

Heat results from the vibrations of atoms – this is kinetic energy

 

Heat is transferred along a gradient

  conductive – particle to particle

  radiative – by electromagnetic radiation      infra-red radiation

 

 

 

The effect of heat on density of matter

 

Phase transitions are controlled by:

  heat (energy available – outward force)

  pressure (constraining force)

 

 

At 5,000 meters altitude, water boils at a:

   higher or lower temperature?

 

At 5,000 meters in the ocean, water boils

   at a: higher or lower temperature?

 

So…as temperature increases:

 

  atoms (or molecules) vibrate faster and with greater amplitude

 

  these vibrations “push” the atoms farther apart

 

  which lowers the density of the material

 

Phase Transitions

 

 

 

 

 

 

 

 

Melting is the transition from solid to liquid

  freezing is the reverse

 

Evaporation (vaporization) is the transition from liquid to gas

  condensation is the reverse

Hydrogen Bonding of Water

Because a water molecule is bipolar, it has hydrogen bonding

  between the  individual molecules

 

This is only 4% of the force of the covalent bond,

  BUT it gives water unique properties

 

Unique Properties of Water

Higher melting and boiling point than other hydrogen compounds

 

Higher heat capacity  than any substance other than ammonia

 [amount of heat needed to raise the temperature of 1 gram of water 1oC]

 

Greater solvent power than any other substance

Highest surface tension of any other liquid

 

Only substance that naturally occurs as a solid, liquid, and a gas at Earth-

  surface temperatures and pressures

 

As Water Freezes

The angle between the hydrogen atoms increases from 105o to 109.5o

 

The molecules form hexagons and “lock in place”

The center of the hexagons in ice are empty space, so…

    ice is 8% less dense than liquid water

 

Energy (heat) is released

Hydration of Ions

Ionic bonds are only 1/10 as strong as covalent bonds

The polar ends of water are attracted to both anions and cations,

  this forms a “hydration sheath” of water molecules surrounding the ion

Ions are held in solution

 

What is a mineral?

Naturally occurring solid

Specific chemical composition

Crystal structure (regularly repeating units in 3 dimensions)

 

Properties of halite (NaCl)

  (1)  pattern of repeating atoms

  (2)  bonding between atoms

  (3)  chemical properties of Na and Cl

 

Structure of haliteMineral composed of Na Cl     Figure 2.2

 

Electron shells of an atom

  Figure 2.3

 

Filling electron shells

  Figure 2.4

  First shell – 2 electrons  equivalent to helium

 

  2nd shell – 8 electrons    equivalent to neon

 

Filling shells – Na and Cl

    Figure 2.5

Na has only 1 electron in the outer (3rd) shell

           

Cl needs 1 more electron in the outer (3rd) shell

 

 

The result: two ions   Box 2.2

  Each ion is much more stable than the neutral atoms

  The two ions are attracted to each other by the electrical  charge (similar to magnets)  

 

Ionic bonds hold together NaCl     Figure 2.18

 

The 3-D repeating structure is a crystal, and forms the mineral halite

 

Bonds between molecules

Ionic bonds – electrons stay on one atom, creating positive and negative ions

 

Covalent bonds – the electrons are shared between the atoms, keeping the nuclei

  close together

 

Metallic bonds – nuclei stay close together, but the electrons are free to flow along

  a group of atoms

 

Hydrogen bonding (between molecules)

 

Covalent bonds are generally strongest

  Examples from the textbook: graphite and diamond    Box 2.2

 

Building blocks of rocks – silicates

 

Tetrahedron of silica  Figure 2.7

 

Valence (net charge) on silica tetrahedra    Figure 2.8

 

The Si is +4, and each O is –2 (total of –8)

 

Stacked tetrahedra work together

Charge balanced by cations

Olivine crystal – Fe2+ or Mg2+  fill in between silica tetrahedra  Figure 2.10

 

Single tetrahedra to single chains  Figure 2.9

Olivine (single)  to  pyroxenes (single chain)

 

Charge balance in chain silicates    Figure 2.11

Cation can be Fe2+ or Mg2+  or Ca2+

 

Single chains to double chains     Figure 2.9

Amphibole group (double chains)

 

Double chains to sheets    Figure 2.9

Mica group and clay group (sheets)

 

Sheet silicates (such as micas)    Box 2.4

Strong bonds within layers, but weak bonds between layers

 

Sheets to framework

Quartz and feldspar (framework silicates; abundant in granite)

 

3-D structure of a framework silicate -- Feldspar

            alkali cations (Ca2+, Na+, K+) in a framework of (Al, Si)O4

            silica tetrahedra connected on corners

 

Common silicate minerals    Table 2.2

Olivine

Pyroxenes

Amphiboles

Micas

Feldspars

Quartz

 

***  These are in the order of Bowen’s reaction series  ***

This order of minerals will reappear and help explain the igneous rocks

 

Solvent Power of Water

    Because water is a bipolar molecule, it easily dissolves any molecules with ionic

            bonding, such as salts

 

Hydration of sheet silicates (such as clays)    Box 2.4

 

Expandable clays – water fits in between clay mineral layers